Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 CROCCP2-202ENST00000412962 2773 ntBASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
CTC1Q2NKJ3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 AL138688.1-201ENST00000624851 1594 ntBASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 GPR53P-205ENST00000457298 1084 ntBASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 IGHV3-71-201ENST00000523324 359 ntBASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 MIR6799-201ENST00000620297 69 ntBASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTC1Q2NKJ3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 MIR3909-201ENST00000579518 119 ntBASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AC018529.1-201ENST00000613063 361 ntBASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AL138828.2-201ENST00000615812 383 ntBASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 SPDYE12P-201ENST00000618416 771 ntBASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTC1Q2NKJ3 AL353732.1-201ENST00000569618 1459 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms