Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 AL022328.1-201ENST00000610050 478 ntBASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 AL139327.4-201ENST00000612362 153 ntBASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 AC015967.2-201ENST00000624092 234 ntBASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 AC006435.4-201ENST00000625037 234 ntBASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 AL356737.1-201ENST00000634391 234 ntBASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.01■□□□□ 0.15
RSPO4Q2I0M5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 CDK2AP2P3-201ENST00000422476 372 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 LDHBP1-201ENST00000455730 1119 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 RRP7BP-205ENST00000566851 833 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AC010328.2-201ENST00000597698 1111 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AL118558.3-201ENST00000607414 1079 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 AC091271.1-201ENST00000611877 1162 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 RPSAP52-203ENST00000622976 1023 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 AL033527.5-202ENST00000641632 1098 ntBASIC16■□□□□ 0.15
RSPO4Q2I0M5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16■□□□□ 0.15
RSPO4Q2I0M5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16■□□□□ 0.15
RSPO4Q2I0M5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 CALR4P-201ENST00000431943 946 ntBASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 AC006033.1-201ENST00000440505 426 ntBASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.99■□□□□ 0.15
RSPO4Q2I0M5 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms