Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL16A1Q07092 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AC116353.5-201ENST00000638148 1699 ntBASIC21.98■■□□□ 1.11
COL16A1Q07092 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AL355334.1-201ENST00000417713 215 ntBASIC21.98■■□□□ 1.11
COL16A1Q07092 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.98■■□□□ 1.11
COL16A1Q07092 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AC244452.3-201ENST00000636814 210 ntBASIC21.98■■□□□ 1.11
COL16A1Q07092 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.98■■□□□ 1.11
COL16A1Q07092 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL16A1Q07092 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21.98■■□□□ 1.11
COL16A1Q07092 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.97■■□□□ 1.11
COL16A1Q07092 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 EEF1DP4-201ENST00000446006 880 ntBASIC21.97■■□□□ 1.11
COL16A1Q07092 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.97■■□□□ 1.11
COL16A1Q07092 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.97■■□□□ 1.11
COL16A1Q07092 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.97■■□□□ 1.11
COL16A1Q07092 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.97■■□□□ 1.11
COL16A1Q07092 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.97■■□□□ 1.11
COL16A1Q07092 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL16A1Q07092 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.97■■□□□ 1.11
COL16A1Q07092 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 AC134312.5-201ENST00000568031 1313 ntBASIC21.96■■□□□ 1.11
COL16A1Q07092 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 CSH2-202ENST00000345366 598 ntTSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.96■■□□□ 1.11
COL16A1Q07092 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.96■■□□□ 1.11
COL16A1Q07092 AC134915.1-201ENST00000426461 574 ntBASIC21.96■■□□□ 1.11
COL16A1Q07092 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC21.96■■□□□ 1.11
COL16A1Q07092 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.96■■□□□ 1.11
COL16A1Q07092 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.96■■□□□ 1.11
COL16A1Q07092 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.96■■□□□ 1.11
COL16A1Q07092 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL16A1Q07092 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.95■■□□□ 1.11
COL16A1Q07092 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
COL16A1Q07092 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 RN7SL769P-201ENST00000469386 295 ntBASIC21.95■■□□□ 1.1
COL16A1Q07092 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL16A1Q07092 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.95■■□□□ 1.1
COL16A1Q07092 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
COL16A1Q07092 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
COL16A1Q07092 AC018635.2-201ENST00000608625 364 ntBASIC21.95■■□□□ 1.1
COL16A1Q07092 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms