Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SEC61A1P61619 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 AC092171.3-201ENST00000610122 2651 ntBASIC14.68□□□□□ -0.06
SEC61A1P61619 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC61A1P61619 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC61A1P61619 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC61A1P61619 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC61A1P61619 RNPS1P1-201ENST00000507437 918 ntBASIC14.67□□□□□ -0.06
SEC61A1P61619 RNA5SP419-201ENST00000515908 135 ntBASIC14.67□□□□□ -0.06
SEC61A1P61619 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SEC61A1P61619 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC61A1P61619 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC61A1P61619 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC61A1P61619 AL049840.3-201ENST00000602669 611 ntBASIC14.67□□□□□ -0.06
SEC61A1P61619 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 AL773604.1-201ENST00000617417 272 ntBASIC14.67□□□□□ -0.06
SEC61A1P61619 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.67□□□□□ -0.06
SEC61A1P61619 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC61A1P61619 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC61A1P61619 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC61A1P61619 DBET-201ENST00000630918 3363 ntBASIC14.67□□□□□ -0.06
SEC61A1P61619 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SEC61A1P61619 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC099063.4-201ENST00000641099 1602 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.66□□□□□ -0.06
SEC61A1P61619 COX5BP2-201ENST00000392354 334 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AL031284.1-201ENST00000419297 478 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.66□□□□□ -0.06
SEC61A1P61619 HNRNPDP1-201ENST00000439535 754 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC018712.1-201ENST00000455767 687 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC122714.2-201ENST00000502787 707 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AC073648.2-201ENST00000510116 352 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.66□□□□□ -0.06
SEC61A1P61619 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC021087.4-201ENST00000563761 564 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC61A1P61619 AP001005.1-201ENST00000571755 1248 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.66□□□□□ -0.06
SEC61A1P61619 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
SEC61A1P61619 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AP000867.4-201ENST00000641616 219 ntBASIC14.66□□□□□ -0.06
SEC61A1P61619 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC61A1P61619 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms