Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH11P55287 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH11P55287 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH11P55287 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH11P55287 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH11P55287 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH11P55287 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH11P55287 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH11P55287 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH11P55287 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH11P55287 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH11P55287 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
CDH11P55287 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CDH11P55287 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH11P55287 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDH11P55287 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 KLF4P1-201ENST00000412782 1185 ntBASIC15.33■□□□□ 0.04
CDH11P55287 ABCD1P5-201ENST00000445663 754 ntBASIC15.33■□□□□ 0.04
CDH11P55287 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH11P55287 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH11P55287 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CDH11P55287 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH11P55287 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH11P55287 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.32■□□□□ 0.04
CDH11P55287 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH11P55287 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH11P55287 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH11P55287 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH11P55287 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CDH11P55287 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH11P55287 BX640515.1-201ENST00000617215 977 ntBASIC15.32■□□□□ 0.04
CDH11P55287 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH11P55287 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH11P55287 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH11P55287 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH11P55287 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms