Protein–RNA interactions for Protein: P55210

CASP7, Caspase-7, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7P55210 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.42■□□□□ 0.86
CASP7P55210 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.42■□□□□ 0.86
CASP7P55210 AC002472.2-201ENST00000442739 958 ntBASIC20.42■□□□□ 0.86
CASP7P55210 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.42■□□□□ 0.86
CASP7P55210 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.42■□□□□ 0.86
CASP7P55210 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.42■□□□□ 0.86
CASP7P55210 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.42■□□□□ 0.86
CASP7P55210 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
CASP7P55210 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CASP7P55210 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.42■□□□□ 0.86
CASP7P55210 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CASP7P55210 AC026471.1-201ENST00000564629 3026 ntBASIC20.42■□□□□ 0.86
CASP7P55210 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CASP7P55210 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.42■□□□□ 0.86
CASP7P55210 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 AC236430.1-201ENST00000402231 743 ntBASIC20.41■□□□□ 0.86
CASP7P55210 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.41■□□□□ 0.86
CASP7P55210 TSPY16P-201ENST00000449843 468 ntBASIC20.41■□□□□ 0.86
CASP7P55210 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.41■□□□□ 0.86
CASP7P55210 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.41■□□□□ 0.86
CASP7P55210 AC009407.1-201ENST00000568958 598 ntBASIC20.41■□□□□ 0.86
CASP7P55210 AC138761.1-201ENST00000584393 385 ntBASIC20.41■□□□□ 0.86
CASP7P55210 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.41■□□□□ 0.86
CASP7P55210 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.41■□□□□ 0.86
CASP7P55210 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CASP7P55210 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.41■□□□□ 0.86
CASP7P55210 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CASP7P55210 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASP7P55210 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CASP7P55210 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASP7P55210 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.4■□□□□ 0.86
CASP7P55210 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.4■□□□□ 0.86
CASP7P55210 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASP7P55210 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.4■□□□□ 0.86
CASP7P55210 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.4■□□□□ 0.86
CASP7P55210 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CASP7P55210 AL079307.3-201ENST00000556114 283 ntBASIC20.4■□□□□ 0.86
CASP7P55210 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.4■□□□□ 0.86
CASP7P55210 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CASP7P55210 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CASP7P55210 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CASP7P55210 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASP7P55210 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CASP7P55210 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.39■□□□□ 0.86
CASP7P55210 U82695.1-201ENST00000635752 1889 ntBASIC20.39■□□□□ 0.86
CASP7P55210 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.39■□□□□ 0.86
CASP7P55210 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.39■□□□□ 0.86
CASP7P55210 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.39■□□□□ 0.85
CASP7P55210 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 AC011676.5-201ENST00000624864 2660 ntBASIC20.39■□□□□ 0.85
CASP7P55210 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CASP7P55210 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CASP7P55210 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.39■□□□□ 0.85
CASP7P55210 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.39■□□□□ 0.85
CASP7P55210 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CASP7P55210 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.39■□□□□ 0.85
CASP7P55210 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASP7P55210 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CASP7P55210 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP7P55210 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASP7P55210 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms