Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 NOC2LP2-201ENST00000407594 1944 ntBASIC19.08■□□□□ 0.65
HMGCS2P54868 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 AL391256.1-201ENST00000443260 1855 ntBASIC19.08■□□□□ 0.65
HMGCS2P54868 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HMGCS2P54868 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCS2P54868 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HMGCS2P54868 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 DGCR5-201ENST00000399539 862 ntBASIC19.08■□□□□ 0.64
HMGCS2P54868 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS2P54868 U91328.1-201ENST00000437528 223 ntBASIC19.08■□□□□ 0.64
HMGCS2P54868 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 AC093724.1-201ENST00000448659 1027 ntBASIC19.08■□□□□ 0.64
HMGCS2P54868 ZNF890P-202ENST00000530367 1156 ntBASIC19.08■□□□□ 0.64
HMGCS2P54868 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.08■□□□□ 0.64
HMGCS2P54868 AC044860.1-202ENST00000559481 777 ntBASIC19.08■□□□□ 0.64
HMGCS2P54868 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGCS2P54868 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HMGCS2P54868 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
HMGCS2P54868 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCS2P54868 BTBD7P1-201ENST00000447253 1453 ntBASIC19.08■□□□□ 0.64
HMGCS2P54868 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HMGCS2P54868 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCS2P54868 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCS2P54868 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HMGCS2P54868 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCS2P54868 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.07■□□□□ 0.64
HMGCS2P54868 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCS2P54868 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCS2P54868 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCS2P54868 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.07■□□□□ 0.64
HMGCS2P54868 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCS2P54868 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 AL512652.2-201ENST00000625156 1716 ntBASIC19.07■□□□□ 0.64
HMGCS2P54868 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 AL133373.2-201ENST00000623187 2828 ntBASIC19.07■□□□□ 0.64
HMGCS2P54868 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS2P54868 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCS2P54868 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HMGCS2P54868 SPDYE19P-201ENST00000338590 713 ntBASIC19.06■□□□□ 0.64
HMGCS2P54868 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 DFFBP1-201ENST00000433250 979 ntBASIC19.06■□□□□ 0.64
HMGCS2P54868 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 SPDYE18-201ENST00000510091 1050 ntBASIC19.06■□□□□ 0.64
HMGCS2P54868 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGCS2P54868 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HMGCS2P54868 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCS2P54868 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS2P54868 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS2P54868 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms