Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.18■□□□□ 0.5
ACLYP53396 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.18■□□□□ 0.5
ACLYP53396 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ACLYP53396 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.18■□□□□ 0.5
ACLYP53396 AL589987.1-201ENST00000453380 819 ntBASIC18.18■□□□□ 0.5
ACLYP53396 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.18■□□□□ 0.5
ACLYP53396 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.18■□□□□ 0.5
ACLYP53396 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.18■□□□□ 0.5
ACLYP53396 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.18■□□□□ 0.5
ACLYP53396 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.18■□□□□ 0.5
ACLYP53396 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.18■□□□□ 0.5
ACLYP53396 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.18■□□□□ 0.5
ACLYP53396 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.18■□□□□ 0.5
ACLYP53396 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ACLYP53396 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ACLYP53396 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ACLYP53396 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ACLYP53396 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ACLYP53396 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.18■□□□□ 0.5
ACLYP53396 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ACLYP53396 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.17■□□□□ 0.5
ACLYP53396 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ACLYP53396 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.17■□□□□ 0.5
ACLYP53396 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.17■□□□□ 0.5
ACLYP53396 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.17■□□□□ 0.5
ACLYP53396 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.17■□□□□ 0.5
ACLYP53396 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.17■□□□□ 0.5
ACLYP53396 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.17■□□□□ 0.5
ACLYP53396 MIR6069-201ENST00000620069 79 ntBASIC18.17■□□□□ 0.5
ACLYP53396 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ACLYP53396 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
ACLYP53396 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.17■□□□□ 0.5
ACLYP53396 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.17■□□□□ 0.5
ACLYP53396 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ACLYP53396 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.17■□□□□ 0.5
ACLYP53396 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ACLYP53396 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
ACLYP53396 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.16■□□□□ 0.5
ACLYP53396 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.16■□□□□ 0.5
ACLYP53396 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 AC098850.1-201ENST00000419919 790 ntBASIC18.16■□□□□ 0.5
ACLYP53396 TMEM14DP-201ENST00000422205 345 ntBASIC18.16■□□□□ 0.5
ACLYP53396 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.16■□□□□ 0.5
ACLYP53396 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 MIR4259-201ENST00000584466 101 ntBASIC18.16■□□□□ 0.5
ACLYP53396 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ACLYP53396 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms