Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.33■□□□□ 0.52
CPT1AP50416 AC026979.3-201ENST00000607315 403 ntBASIC18.33■□□□□ 0.52
CPT1AP50416 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.33■□□□□ 0.52
CPT1AP50416 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CPT1AP50416 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPT1AP50416 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPT1AP50416 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CPT1AP50416 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPT1AP50416 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 SERBP1P3-201ENST00000459980 809 ntBASIC18.32■□□□□ 0.52
CPT1AP50416 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.32■□□□□ 0.52
CPT1AP50416 API5-211ENST00000534695 560 ntTSL 5 BASIC18.32■□□□□ 0.52
CPT1AP50416 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.32■□□□□ 0.52
CPT1AP50416 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CPT1AP50416 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.32■□□□□ 0.52
CPT1AP50416 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPT1AP50416 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPT1AP50416 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
CPT1AP50416 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPT1AP50416 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CPT1AP50416 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 AL391825.1-201ENST00000457671 1364 ntBASIC18.31■□□□□ 0.52
CPT1AP50416 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 DFFBP1-201ENST00000433250 979 ntBASIC18.31■□□□□ 0.52
CPT1AP50416 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.31■□□□□ 0.52
CPT1AP50416 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.31■□□□□ 0.52
CPT1AP50416 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 AL589702.1-201ENST00000641229 1509 ntBASIC18.31■□□□□ 0.52
CPT1AP50416 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.31■□□□□ 0.52
CPT1AP50416 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPT1AP50416 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CPT1AP50416 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
CPT1AP50416 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
CPT1AP50416 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
CPT1AP50416 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CPT1AP50416 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CPT1AP50416 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CPT1AP50416 AC098614.1-201ENST00000368528 745 ntBASIC18.3■□□□□ 0.52
CPT1AP50416 AC087499.6-201ENST00000411576 835 ntBASIC18.3■□□□□ 0.52
CPT1AP50416 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.3■□□□□ 0.52
CPT1AP50416 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.3■□□□□ 0.52
CPT1AP50416 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.3■□□□□ 0.52
CPT1AP50416 AC104794.3-201ENST00000566840 1248 ntBASIC18.3■□□□□ 0.52
CPT1AP50416 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.3■□□□□ 0.52
CPT1AP50416 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms