Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
SOX2P48431 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.74□□□□□ -0.05
SOX2P48431 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
SOX2P48431 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SOX2P48431 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.74□□□□□ -0.05
SOX2P48431 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SOX2P48431 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.74□□□□□ -0.05
SOX2P48431 AC004817.3-201ENST00000602957 2129 ntBASIC14.74□□□□□ -0.05
SOX2P48431 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SOX2P48431 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.74□□□□□ -0.05
SOX2P48431 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 AC233702.3-201ENST00000578656 1387 ntBASIC14.73□□□□□ -0.05
SOX2P48431 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 KRT18P1-202ENST00000452408 1331 ntBASIC14.73□□□□□ -0.05
SOX2P48431 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 RCN1P2-201ENST00000398357 915 ntBASIC14.73□□□□□ -0.05
SOX2P48431 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.73□□□□□ -0.05
SOX2P48431 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.73□□□□□ -0.05
SOX2P48431 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.73□□□□□ -0.05
SOX2P48431 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 LINC01023-201ENST00000606054 436 ntBASIC14.73□□□□□ -0.05
SOX2P48431 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.73□□□□□ -0.05
SOX2P48431 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.73□□□□□ -0.05
SOX2P48431 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 AL161772.1-201ENST00000610494 4412 ntBASIC14.73□□□□□ -0.05
SOX2P48431 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SOX2P48431 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SOX2P48431 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SOX2P48431 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.72□□□□□ -0.05
SOX2P48431 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.72□□□□□ -0.05
SOX2P48431 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SOX2P48431 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SOX2P48431 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SOX2P48431 LINC00982-205ENST00000420957 435 ntBASIC14.72□□□□□ -0.05
SOX2P48431 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.72□□□□□ -0.05
SOX2P48431 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.72□□□□□ -0.05
SOX2P48431 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SOX2P48431 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
SOX2P48431 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.72□□□□□ -0.05
SOX2P48431 Z69720.1-201ENST00000601483 472 ntBASIC14.72□□□□□ -0.05
SOX2P48431 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms