Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 AC025580.3-201ENST00000617932 1424 ntBASIC16.05■□□□□ 0.16
SLC6A12P48065 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC6A12P48065 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLC6A12P48065 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 AC007967.2-201ENST00000432613 625 ntBASIC16.05■□□□□ 0.16
SLC6A12P48065 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A12P48065 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A12P48065 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC6A12P48065 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
SLC6A12P48065 KRT19P2-202ENST00000557173 1012 ntBASIC16.05■□□□□ 0.16
SLC6A12P48065 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A12P48065 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 AL009183.1-201ENST00000603760 355 ntBASIC16.05■□□□□ 0.16
SLC6A12P48065 AC004877.2-201ENST00000623941 599 ntBASIC16.05■□□□□ 0.16
SLC6A12P48065 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC6A12P48065 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC6A12P48065 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC6A12P48065 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC6A12P48065 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC6A12P48065 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 BCAR1-209ENST00000546196 1340 ntBASIC16.04■□□□□ 0.16
SLC6A12P48065 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 AC026396.1-201ENST00000419388 421 ntBASIC16.04■□□□□ 0.16
SLC6A12P48065 AC140658.5-201ENST00000438532 169 ntBASIC16.04■□□□□ 0.16
SLC6A12P48065 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC6A12P48065 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.04■□□□□ 0.16
SLC6A12P48065 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC6A12P48065 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC6A12P48065 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC6A12P48065 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC6A12P48065 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC6A12P48065 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SLC6A12P48065 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC6A12P48065 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms