Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.4■□□□□ 0.54
HTTP42858 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
HTTP42858 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.4■□□□□ 0.54
HTTP42858 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.4■□□□□ 0.54
HTTP42858 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 LINC01451-201ENST00000623792 534 ntBASIC18.4■□□□□ 0.54
HTTP42858 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 KRT8P19-201ENST00000551916 1455 ntBASIC18.4■□□□□ 0.54
HTTP42858 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTTP42858 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HTTP42858 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HTTP42858 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.39■□□□□ 0.54
HTTP42858 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.39■□□□□ 0.53
HTTP42858 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.39■□□□□ 0.53
HTTP42858 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.39■□□□□ 0.53
HTTP42858 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HTTP42858 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.39■□□□□ 0.53
HTTP42858 AC005702.4-201ENST00000618393 416 ntBASIC18.39■□□□□ 0.53
HTTP42858 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 AL136982.4-201ENST00000437689 1740 ntBASIC18.39■□□□□ 0.53
HTTP42858 AC133963.1-201ENST00000504166 1679 ntBASIC18.39■□□□□ 0.53
HTTP42858 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HTTP42858 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.39■□□□□ 0.53
HTTP42858 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.39■□□□□ 0.53
HTTP42858 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.39■□□□□ 0.53
HTTP42858 AC079328.1-201ENST00000560358 952 ntBASIC18.39■□□□□ 0.53
HTTP42858 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.39■□□□□ 0.53
HTTP42858 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HTTP42858 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTTP42858 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.38■□□□□ 0.53
HTTP42858 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.38■□□□□ 0.53
HTTP42858 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.38■□□□□ 0.53
HTTP42858 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 BICD1-207ENST00000551848 1962 ntBASIC18.38■□□□□ 0.53
HTTP42858 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 HIST3H2BA-201ENST00000436555 524 ntBASIC18.38■□□□□ 0.53
HTTP42858 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.38■□□□□ 0.53
HTTP42858 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 KRT8P22-201ENST00000562317 1415 ntBASIC18.38■□□□□ 0.53
HTTP42858 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.38■□□□□ 0.53
HTTP42858 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.38■□□□□ 0.53
HTTP42858 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.38■□□□□ 0.53
HTTP42858 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTTP42858 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HTTP42858 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HTTP42858 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.37■□□□□ 0.53
HTTP42858 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HTTP42858 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.37■□□□□ 0.53
HTTP42858 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.37■□□□□ 0.53
HTTP42858 RARRES2P5-201ENST00000564013 466 ntBASIC18.37■□□□□ 0.53
HTTP42858 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.37■□□□□ 0.53
HTTP42858 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HTTP42858 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.37■□□□□ 0.53
HTTP42858 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HTTP42858 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTTP42858 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms