Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TUBB7P-202ENST00000428444 1305 ntBASIC14.58□□□□□ -0.08
GDNFP39905 TUBB8P7-204ENST00000567960 1332 ntBASIC14.58□□□□□ -0.08
GDNFP39905 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.58□□□□□ -0.08
GDNFP39905 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.58□□□□□ -0.08
GDNFP39905 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.58□□□□□ -0.08
GDNFP39905 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.58□□□□□ -0.08
GDNFP39905 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GDNFP39905 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
GDNFP39905 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GDNFP39905 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 AC010491.1-201ENST00000563101 2797 ntBASIC14.57□□□□□ -0.08
GDNFP39905 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 GPR89P-201ENST00000407924 1495 ntBASIC14.57□□□□□ -0.08
GDNFP39905 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.57□□□□□ -0.08
GDNFP39905 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
GDNFP39905 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.57□□□□□ -0.08
GDNFP39905 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 TPSP2-201ENST00000561760 610 ntBASIC14.57□□□□□ -0.08
GDNFP39905 AC011840.4-201ENST00000578471 627 ntBASIC14.57□□□□□ -0.08
GDNFP39905 MIR3180-1-201ENST00000580374 94 ntBASIC14.57□□□□□ -0.08
GDNFP39905 MIR3180-3-201ENST00000584616 94 ntBASIC14.57□□□□□ -0.08
GDNFP39905 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.57□□□□□ -0.08
GDNFP39905 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 AC073347.1-201ENST00000421633 2643 ntBASIC14.57□□□□□ -0.08
GDNFP39905 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.57□□□□□ -0.08
GDNFP39905 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDNFP39905 AC125634.1-201ENST00000438758 1403 ntBASIC14.57□□□□□ -0.08
GDNFP39905 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GDNFP39905 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GDNFP39905 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GDNFP39905 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 AP002414.2-201ENST00000591780 3365 ntBASIC14.56□□□□□ -0.08
GDNFP39905 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GDNFP39905 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
GDNFP39905 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GDNFP39905 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.56□□□□□ -0.08
GDNFP39905 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.56□□□□□ -0.08
GDNFP39905 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.56□□□□□ -0.08
GDNFP39905 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.56□□□□□ -0.08
GDNFP39905 AC109462.3-201ENST00000573934 613 ntBASIC14.56□□□□□ -0.08
GDNFP39905 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GDNFP39905 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 AC019129.2-201ENST00000609837 1235 ntBASIC14.56□□□□□ -0.08
GDNFP39905 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 NPAP1P7-201ENST00000613027 823 ntBASIC14.56□□□□□ -0.08
GDNFP39905 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDNFP39905 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.56□□□□□ -0.08
GDNFP39905 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms