Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COPB2P35606 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.97■□□□□ 0.63
COPB2P35606 AC073439.1-201ENST00000624121 1774 ntBASIC18.97■□□□□ 0.63
COPB2P35606 TSSK5P-201ENST00000423978 907 ntBASIC18.97■□□□□ 0.63
COPB2P35606 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.97■□□□□ 0.63
COPB2P35606 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.97■□□□□ 0.63
COPB2P35606 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.97■□□□□ 0.63
COPB2P35606 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.97■□□□□ 0.63
COPB2P35606 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.97■□□□□ 0.63
COPB2P35606 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.97■□□□□ 0.63
COPB2P35606 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.97■□□□□ 0.63
COPB2P35606 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.97■□□□□ 0.63
COPB2P35606 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COPB2P35606 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.96■□□□□ 0.63
COPB2P35606 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COPB2P35606 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.96■□□□□ 0.63
COPB2P35606 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPB2P35606 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.96■□□□□ 0.63
COPB2P35606 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.96■□□□□ 0.63
COPB2P35606 AC005034.1-201ENST00000426657 489 ntBASIC18.96■□□□□ 0.63
COPB2P35606 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPB2P35606 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.96■□□□□ 0.63
COPB2P35606 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.96■□□□□ 0.63
COPB2P35606 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.96■□□□□ 0.63
COPB2P35606 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.96■□□□□ 0.63
COPB2P35606 AL138828.2-201ENST00000615812 383 ntBASIC18.96■□□□□ 0.63
COPB2P35606 AL035252.4-201ENST00000624174 288 ntBASIC18.96■□□□□ 0.63
COPB2P35606 AL139011.1-202ENST00000642063 584 ntBASIC18.96■□□□□ 0.63
COPB2P35606 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPB2P35606 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPB2P35606 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.96■□□□□ 0.63
COPB2P35606 AC022144.1-201ENST00000602255 1580 ntBASIC18.96■□□□□ 0.63
COPB2P35606 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPB2P35606 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.96■□□□□ 0.63
COPB2P35606 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.95■□□□□ 0.62
COPB2P35606 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.95■□□□□ 0.62
COPB2P35606 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.95■□□□□ 0.62
COPB2P35606 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 CRB3P1-201ENST00000449338 276 ntBASIC18.95■□□□□ 0.62
COPB2P35606 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.95■□□□□ 0.62
COPB2P35606 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.95■□□□□ 0.62
COPB2P35606 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COPB2P35606 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.95■□□□□ 0.62
COPB2P35606 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPB2P35606 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 PIN1P1-201ENST00000412108 996 ntBASIC18.94■□□□□ 0.62
COPB2P35606 MRPS18AP1-201ENST00000414458 589 ntBASIC18.94■□□□□ 0.62
COPB2P35606 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms