Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRT9P35527 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KRT9P35527 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT9P35527 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT9P35527 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 FGFR3P6-201ENST00000457012 610 ntBASIC18.29■□□□□ 0.52
KRT9P35527 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT9P35527 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT9P35527 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT9P35527 TERC-201ENST00000602385 541 ntBASIC18.29■□□□□ 0.52
KRT9P35527 IFNL4P1-201ENST00000607083 540 ntBASIC18.29■□□□□ 0.52
KRT9P35527 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT9P35527 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 NCF1C-201ENST00000438382 1427 ntBASIC18.29■□□□□ 0.52
KRT9P35527 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 AL590787.1-201ENST00000568856 1315 ntBASIC18.28■□□□□ 0.52
KRT9P35527 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.28■□□□□ 0.52
KRT9P35527 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT9P35527 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT9P35527 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT9P35527 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT9P35527 AC064862.7-201ENST00000604520 867 ntBASIC18.28■□□□□ 0.52
KRT9P35527 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT9P35527 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT9P35527 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT9P35527 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT9P35527 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRT9P35527 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
KRT9P35527 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT9P35527 LINC00554-201ENST00000564841 3011 ntBASIC18.28■□□□□ 0.52
KRT9P35527 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT9P35527 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT9P35527 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 AKR1C7P-201ENST00000305623 895 ntBASIC18.27■□□□□ 0.52
KRT9P35527 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 AF238378.1-201ENST00000526806 358 ntBASIC18.27■□□□□ 0.52
KRT9P35527 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 SART3-203ENST00000546611 1184 ntBASIC18.27■□□□□ 0.52
KRT9P35527 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRT9P35527 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT9P35527 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRT9P35527 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT9P35527 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT9P35527 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT9P35527 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRT9P35527 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT9P35527 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.27■□□□□ 0.51
KRT9P35527 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT9P35527 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT9P35527 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT9P35527 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRT9P35527 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
KRT9P35527 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms