Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXC8P31273 AL139010.1-201ENST00000454878 894 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 SDHAP3-202ENST00000515467 728 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXC8P31273 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
HOXC8P31273 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXC8P31273 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 PCGF3-213ENST00000620529 1899 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 GGT3P-204ENST00000453783 1664 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HOXC8P31273 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HOXC8P31273 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC8P31273 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.95■□□□□ 0.46
HOXC8P31273 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HOXC8P31273 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC8P31273 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HOXC8P31273 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXC8P31273 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 HIST3H2BA-201ENST00000436555 524 ntBASIC17.95■□□□□ 0.46
HOXC8P31273 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXC8P31273 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 AC099568.2-201ENST00000609194 695 ntBASIC17.95■□□□□ 0.46
HOXC8P31273 AC004461.2-201ENST00000629517 803 ntBASIC17.95■□□□□ 0.46
HOXC8P31273 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HOXC8P31273 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC8P31273 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC8P31273 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC8P31273 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC8P31273 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HOXC8P31273 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC8P31273 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HOXC8P31273 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.94■□□□□ 0.46
HOXC8P31273 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC8P31273 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXC8P31273 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
HOXC8P31273 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.94■□□□□ 0.46
HOXC8P31273 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC8P31273 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HOXC8P31273 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC8P31273 AC092337.1-201ENST00000568699 1129 ntBASIC17.94■□□□□ 0.46
HOXC8P31273 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXC8P31273 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.94■□□□□ 0.46
HOXC8P31273 MIR4321-201ENST00000592276 80 ntBASIC17.94■□□□□ 0.46
HOXC8P31273 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXC8P31273 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HOXC8P31273 IGHV3-72-202ENST00000621503 303 ntBASIC17.94■□□□□ 0.46
HOXC8P31273 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC8P31273 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HOXC8P31273 AIRN-201ENST00000601203 4374 ntBASIC17.93■□□□□ 0.46
HOXC8P31273 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC8P31273 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXC8P31273 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HOXC8P31273 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXC8P31273 LINC01144-201ENST00000626198 1710 ntBASIC17.93■□□□□ 0.46
HOXC8P31273 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms