Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SPDYE12P-201ENST00000618416 771 ntBASIC18.91■□□□□ 0.62
CNGA1P29973 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.91■□□□□ 0.62
CNGA1P29973 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNGA1P29973 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CNGA1P29973 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNGA1P29973 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.91■□□□□ 0.62
CNGA1P29973 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNGA1P29973 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CNGA1P29973 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNGA1P29973 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.91■□□□□ 0.62
CNGA1P29973 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.91■□□□□ 0.62
CNGA1P29973 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNGA1P29973 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.91■□□□□ 0.62
CNGA1P29973 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.91■□□□□ 0.62
CNGA1P29973 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNGA1P29973 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CNGA1P29973 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CNGA1P29973 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.9■□□□□ 0.62
CNGA1P29973 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.9■□□□□ 0.62
CNGA1P29973 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.9■□□□□ 0.62
CNGA1P29973 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 RARRES2P9-201ENST00000565168 469 ntBASIC18.9■□□□□ 0.62
CNGA1P29973 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 AC091167.2-201ENST00000579581 588 ntBASIC18.9■□□□□ 0.62
CNGA1P29973 AL138828.2-201ENST00000615812 383 ntBASIC18.9■□□□□ 0.62
CNGA1P29973 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CNGA1P29973 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 TOP3BP1-201ENST00000420768 1380 ntBASIC18.9■□□□□ 0.62
CNGA1P29973 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNGA1P29973 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.9■□□□□ 0.62
CNGA1P29973 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNGA1P29973 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNGA1P29973 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
CNGA1P29973 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
CNGA1P29973 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNGA1P29973 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.89■□□□□ 0.62
CNGA1P29973 AP3S2-216ENST00000617003 1561 ntBASIC18.89■□□□□ 0.62
CNGA1P29973 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.89■□□□□ 0.62
CNGA1P29973 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNGA1P29973 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CNGA1P29973 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CNGA1P29973 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNGA1P29973 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.89■□□□□ 0.61
CNGA1P29973 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.89■□□□□ 0.61
CNGA1P29973 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.89■□□□□ 0.61
CNGA1P29973 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.89■□□□□ 0.61
CNGA1P29973 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.89■□□□□ 0.61
CNGA1P29973 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CNGA1P29973 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.89■□□□□ 0.61
CNGA1P29973 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CNGA1P29973 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CNGA1P29973 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNGA1P29973 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNGA1P29973 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNGA1P29973 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNGA1P29973 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNGA1P29973 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms