Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 AC026471.1-201ENST00000564629 3026 ntBASIC16.35■□□□□ 0.21
BCKDHBP21953 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
BCKDHBP21953 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.34■□□□□ 0.21
BCKDHBP21953 AL023806.1-201ENST00000603994 1649 ntBASIC16.34■□□□□ 0.21
BCKDHBP21953 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 SNX33P1-201ENST00000592116 1762 ntBASIC16.34■□□□□ 0.21
BCKDHBP21953 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
BCKDHBP21953 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BCKDHBP21953 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.34■□□□□ 0.21
BCKDHBP21953 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.34■□□□□ 0.21
BCKDHBP21953 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.34■□□□□ 0.21
BCKDHBP21953 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.34■□□□□ 0.21
BCKDHBP21953 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.34■□□□□ 0.21
BCKDHBP21953 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.34■□□□□ 0.21
BCKDHBP21953 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.34■□□□□ 0.21
BCKDHBP21953 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
BCKDHBP21953 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BCKDHBP21953 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.34■□□□□ 0.21
BCKDHBP21953 HTR7P1-202ENST00000624664 4411 ntBASIC16.34■□□□□ 0.21
BCKDHBP21953 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BCKDHBP21953 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BCKDHBP21953 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
BCKDHBP21953 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
BCKDHBP21953 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BCKDHBP21953 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
BCKDHBP21953 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
BCKDHBP21953 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.33■□□□□ 0.21
BCKDHBP21953 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BCKDHBP21953 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.33■□□□□ 0.2
BCKDHBP21953 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.33■□□□□ 0.2
BCKDHBP21953 RPS2P32-201ENST00000439199 892 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 AC011495.1-201ENST00000498085 584 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.33■□□□□ 0.2
BCKDHBP21953 KRT17P8-201ENST00000540749 863 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.33■□□□□ 0.2
BCKDHBP21953 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.33■□□□□ 0.2
BCKDHBP21953 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 TUBB8P12-201ENST00000308911 1335 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 TUBB7P-202ENST00000428444 1305 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 TUBB8P7-204ENST00000567960 1332 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 SLC7A15P-201ENST00000424028 1363 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.33■□□□□ 0.2
BCKDHBP21953 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 LINC02012-201ENST00000608206 1725 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 AC092053.1-201ENST00000605787 1936 ntBASIC16.33■□□□□ 0.2
BCKDHBP21953 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.33■□□□□ 0.2
BCKDHBP21953 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BCKDHBP21953 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BCKDHBP21953 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 MIR658-201ENST00000385210 100 ntBASIC16.32■□□□□ 0.2
BCKDHBP21953 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCKDHBP21953 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.32■□□□□ 0.2
BCKDHBP21953 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BCKDHBP21953 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.32■□□□□ 0.2
BCKDHBP21953 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.32■□□□□ 0.2
BCKDHBP21953 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms