Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 AC002056.1-201ENST00000395613 760 ntBASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 AC092902.6-201ENST00000641783 218 ntBASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.14■□□□□ 0.17
CCNYL3P0C7X3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TSEN15P1-201ENST00000423257 515 ntBASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 CYMP-203ENST00000474680 1263 ntBASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 MTND2P7-201ENST00000521337 640 ntBASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 ACTL9-202ENST00000612068 1252 ntBASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 AL645728.2-201ENST00000641974 660 ntBASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNYL3P0C7X3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 SLC25A6P2-201ENST00000497974 877 ntBASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 AC105339.1-204ENST00000636249 355 ntBASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNYL3P0C7X3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL3P0C7X3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCNYL3P0C7X3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCNYL3P0C7X3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL3P0C7X3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL3P0C7X3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNYL3P0C7X3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms