Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 ADH5P3-201ENST00000433842 1137 ntBASIC16.72■□□□□ 0.27
MMP2P08253 FAM58CP-201ENST00000435741 640 ntBASIC16.72■□□□□ 0.27
MMP2P08253 ALG1L5P-201ENST00000482043 771 ntBASIC16.72■□□□□ 0.27
MMP2P08253 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP2P08253 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
MMP2P08253 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.72■□□□□ 0.27
MMP2P08253 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.72■□□□□ 0.27
MMP2P08253 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
MMP2P08253 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MMP2P08253 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP2P08253 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP2P08253 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 WASH6P-202ENST00000359512 1437 ntBASIC16.71■□□□□ 0.27
MMP2P08253 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP2P08253 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
MMP2P08253 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MMP2P08253 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MMP2P08253 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP2P08253 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP2P08253 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.71■□□□□ 0.27
MMP2P08253 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.71■□□□□ 0.27
MMP2P08253 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP2P08253 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP2P08253 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MMP2P08253 MTDHP5-201ENST00000598980 586 ntBASIC16.71■□□□□ 0.27
MMP2P08253 AL161645.1-201ENST00000622716 1255 ntBASIC16.71■□□□□ 0.27
MMP2P08253 C20orf181-201ENST00000623918 480 ntBASIC16.71■□□□□ 0.27
MMP2P08253 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP2P08253 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP2P08253 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP2P08253 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP2P08253 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP2P08253 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP2P08253 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MMP2P08253 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
MMP2P08253 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
MMP2P08253 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP2P08253 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.7■□□□□ 0.26
MMP2P08253 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.7■□□□□ 0.26
MMP2P08253 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 AL355306.1-201ENST00000415580 579 ntBASIC16.7■□□□□ 0.26
MMP2P08253 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MMP2P08253 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms