Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TSSK5P-201ENST00000423978 907 ntBASIC16.79■□□□□ 0.28
RETP07949 AC109635.5-201ENST00000533593 962 ntBASIC16.79■□□□□ 0.28
RETP07949 AP000842.3-202ENST00000569238 1080 ntBASIC16.79■□□□□ 0.28
RETP07949 TP53TG3HP-202ENST00000569755 579 ntBASIC16.79■□□□□ 0.28
RETP07949 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RETP07949 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.79■□□□□ 0.28
RETP07949 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
RETP07949 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.79■□□□□ 0.28
RETP07949 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RETP07949 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 WASH6P-202ENST00000359512 1437 ntBASIC16.79■□□□□ 0.28
RETP07949 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RETP07949 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.78■□□□□ 0.28
RETP07949 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RETP07949 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RETP07949 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
RETP07949 MIR346-201ENST00000362234 95 ntBASIC16.78■□□□□ 0.28
RETP07949 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.78■□□□□ 0.28
RETP07949 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.78■□□□□ 0.28
RETP07949 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RETP07949 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.78■□□□□ 0.28
RETP07949 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.78■□□□□ 0.28
RETP07949 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.78■□□□□ 0.28
RETP07949 AC005412.3-201ENST00000580309 715 ntBASIC16.78■□□□□ 0.28
RETP07949 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.78■□□□□ 0.28
RETP07949 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 LINC01451-201ENST00000623792 534 ntBASIC16.78■□□□□ 0.28
RETP07949 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RETP07949 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RETP07949 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RETP07949 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.78■□□□□ 0.28
RETP07949 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RETP07949 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.77■□□□□ 0.28
RETP07949 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.77■□□□□ 0.28
RETP07949 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
RETP07949 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RETP07949 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RETP07949 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RETP07949 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RETP07949 AC098614.1-201ENST00000368528 745 ntBASIC16.77■□□□□ 0.28
RETP07949 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.77■□□□□ 0.28
RETP07949 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.77■□□□□ 0.28
RETP07949 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.77■□□□□ 0.28
RETP07949 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.77■□□□□ 0.28
RETP07949 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.77■□□□□ 0.28
RETP07949 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.77■□□□□ 0.28
RETP07949 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.77■□□□□ 0.28
RETP07949 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.77■□□□□ 0.28
RETP07949 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.77■□□□□ 0.28
RETP07949 HILS1-202ENST00000545329 423 ntBASIC16.77■□□□□ 0.28
RETP07949 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.77■□□□□ 0.28
RETP07949 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RETP07949 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RETP07949 AC017083.2-201ENST00000608069 979 ntBASIC16.77■□□□□ 0.28
RETP07949 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RETP07949 AL118508.1-201ENST00000613502 2345 ntBASIC16.77■□□□□ 0.28
RETP07949 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RETP07949 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.77■□□□□ 0.28
RETP07949 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RETP07949 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RETP07949 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.77■□□□□ 0.27
RETP07949 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RETP07949 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RETP07949 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms