Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.19□□□□□ -0.14
CD3DP04234 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CD3DP04234 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.19□□□□□ -0.14
CD3DP04234 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 KRT8P49-201ENST00000604166 1432 ntBASIC14.19□□□□□ -0.14
CD3DP04234 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.19□□□□□ -0.14
CD3DP04234 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.19□□□□□ -0.14
CD3DP04234 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.19□□□□□ -0.14
CD3DP04234 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CD3DP04234 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.19□□□□□ -0.14
CD3DP04234 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.19□□□□□ -0.14
CD3DP04234 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CD3DP04234 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD3DP04234 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 KRT18P22-201ENST00000402024 1347 ntBASIC14.18□□□□□ -0.14
CD3DP04234 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 PPT1-215ENST00000641471 2368 ntBASIC14.18□□□□□ -0.14
CD3DP04234 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
CD3DP04234 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.18□□□□□ -0.14
CD3DP04234 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.18□□□□□ -0.14
CD3DP04234 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.18□□□□□ -0.14
CD3DP04234 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CD3DP04234 AC005336.2-201ENST00000593183 939 ntBASIC14.18□□□□□ -0.14
CD3DP04234 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CD3DP04234 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.18□□□□□ -0.14
CD3DP04234 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD3DP04234 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD3DP04234 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.17□□□□□ -0.14
CD3DP04234 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD3DP04234 AC067930.6-201ENST00000623257 4947 ntBASIC14.17□□□□□ -0.14
CD3DP04234 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.17□□□□□ -0.14
CD3DP04234 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD3DP04234 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CD3DP04234 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
CD3DP04234 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD3DP04234 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD3DP04234 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD3DP04234 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.17□□□□□ -0.14
CD3DP04234 AC097637.2-201ENST00000624096 1997 ntBASIC14.17□□□□□ -0.14
CD3DP04234 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.17□□□□□ -0.14
CD3DP04234 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.17□□□□□ -0.14
CD3DP04234 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms