Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.42□□□□□ -0.1
HLA-DQB1P01920 YBX1P2-201ENST00000489612 999 ntBASIC14.42□□□□□ -0.1
HLA-DQB1P01920 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 AC139887.4-201ENST00000607877 719 ntBASIC14.42□□□□□ -0.1
HLA-DQB1P01920 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DQB1P01920 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AC104581.4-201ENST00000623126 3052 ntBASIC14.41□□□□□ -0.1
HLA-DQB1P01920 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 HBZP1-201ENST00000354915 429 ntBASIC14.41□□□□□ -0.1
HLA-DQB1P01920 FAM220CP-201ENST00000395253 831 ntBASIC14.41□□□□□ -0.1
HLA-DQB1P01920 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AL138831.2-201ENST00000606564 490 ntBASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AC006277.1-201ENST00000624348 1610 ntBASIC14.41□□□□□ -0.1
HLA-DQB1P01920 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DQB1P01920 AC007191.1-201ENST00000623179 2995 ntBASIC14.4□□□□□ -0.1
HLA-DQB1P01920 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CICP4-201ENST00000447359 2812 ntBASIC14.4□□□□□ -0.1
HLA-DQB1P01920 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AC003669.1-201ENST00000334569 611 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms