Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 TUBB1P2-201ENST00000422712 1306 ntBASIC17.78■□□□□ 0.44
TIMP1P01033 TUBB1P1-201ENST00000503144 1300 ntBASIC17.78■□□□□ 0.44
TIMP1P01033 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.78■□□□□ 0.44
TIMP1P01033 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.78■□□□□ 0.44
TIMP1P01033 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP1P01033 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TIMP1P01033 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP1P01033 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 AC025048.3-201ENST00000590609 569 ntBASIC17.78■□□□□ 0.44
TIMP1P01033 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
TIMP1P01033 AC005702.4-201ENST00000618393 416 ntBASIC17.78■□□□□ 0.44
TIMP1P01033 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.78■□□□□ 0.44
TIMP1P01033 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP1P01033 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.78■□□□□ 0.44
TIMP1P01033 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 AC004408.2-201ENST00000623613 2777 ntBASIC17.78■□□□□ 0.44
TIMP1P01033 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMP1P01033 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TIMP1P01033 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP1P01033 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP1P01033 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP1P01033 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TIMP1P01033 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TIMP1P01033 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 BRWD1P1-201ENST00000401091 371 ntBASIC17.77■□□□□ 0.44
TIMP1P01033 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.77■□□□□ 0.44
TIMP1P01033 AL355994.2-201ENST00000447882 704 ntBASIC17.77■□□□□ 0.44
TIMP1P01033 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.77■□□□□ 0.44
TIMP1P01033 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP1P01033 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.77■□□□□ 0.44
TIMP1P01033 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TIMP1P01033 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.77■□□□□ 0.44
TIMP1P01033 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TIMP1P01033 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP1P01033 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMP1P01033 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TIMP1P01033 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.77■□□□□ 0.43
TIMP1P01033 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TIMP1P01033 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TIMP1P01033 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TIMP1P01033 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TIMP1P01033 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TIMP1P01033 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMP1P01033 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP1P01033 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMP1P01033 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP1P01033 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP1P01033 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMP1P01033 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.76■□□□□ 0.43
TIMP1P01033 RNA5SP412-201ENST00000516234 123 ntBASIC17.76■□□□□ 0.43
TIMP1P01033 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMP1P01033 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP1P01033 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP1P01033 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP1P01033 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP1P01033 AC020765.3-201ENST00000613051 740 ntBASIC17.76■□□□□ 0.43
TIMP1P01033 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TIMP1P01033 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms