Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.81■□□□□ 0.12
CLPTM1O96005 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.81■□□□□ 0.12
CLPTM1O96005 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.81■□□□□ 0.12
CLPTM1O96005 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.81■□□□□ 0.12
CLPTM1O96005 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.81■□□□□ 0.12
CLPTM1O96005 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLPTM1O96005 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.81■□□□□ 0.12
CLPTM1O96005 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.81■□□□□ 0.12
CLPTM1O96005 BX276092.7-203ENST00000637198 1536 ntBASIC15.81■□□□□ 0.12
CLPTM1O96005 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
CLPTM1O96005 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLPTM1O96005 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 AL596087.1-201ENST00000400979 1969 ntBASIC15.8■□□□□ 0.12
CLPTM1O96005 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLPTM1O96005 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLPTM1O96005 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLPTM1O96005 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.8■□□□□ 0.12
CLPTM1O96005 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 AC083849.1-201ENST00000615227 514 ntBASIC15.8■□□□□ 0.12
CLPTM1O96005 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 AC023157.3-201ENST00000619086 2088 ntBASIC15.8■□□□□ 0.12
CLPTM1O96005 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
CLPTM1O96005 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLPTM1O96005 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.8■□□□□ 0.12
CLPTM1O96005 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLPTM1O96005 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.79■□□□□ 0.12
CLPTM1O96005 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLPTM1O96005 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms