Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP3BO95985 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.13■□□□□ 0.33
TOP3BO95985 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TOP3BO95985 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP3BO95985 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP3BO95985 STK25P1-201ENST00000585406 838 ntBASIC17.13■□□□□ 0.33
TOP3BO95985 AC006557.2-201ENST00000592985 1240 ntBASIC17.13■□□□□ 0.33
TOP3BO95985 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TOP3BO95985 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.13■□□□□ 0.33
TOP3BO95985 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TOP3BO95985 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP3BO95985 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TOP3BO95985 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.12■□□□□ 0.33
TOP3BO95985 AC079776.2-201ENST00000641154 1609 ntBASIC17.12■□□□□ 0.33
TOP3BO95985 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.12■□□□□ 0.33
TOP3BO95985 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
TOP3BO95985 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.12■□□□□ 0.33
TOP3BO95985 MIR4751-201ENST00000578027 74 ntBASIC17.12■□□□□ 0.33
TOP3BO95985 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.12■□□□□ 0.33
TOP3BO95985 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.12■□□□□ 0.33
TOP3BO95985 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TOP3BO95985 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TOP3BO95985 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TOP3BO95985 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.11■□□□□ 0.33
TOP3BO95985 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TOP3BO95985 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.11■□□□□ 0.33
TOP3BO95985 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
TOP3BO95985 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 AC122714.2-201ENST00000502787 707 ntBASIC17.11■□□□□ 0.33
TOP3BO95985 AC124947.2-201ENST00000547118 1133 ntBASIC17.11■□□□□ 0.33
TOP3BO95985 AC190387.1-201ENST00000551683 408 ntBASIC17.11■□□□□ 0.33
TOP3BO95985 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.11■□□□□ 0.33
TOP3BO95985 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TOP3BO95985 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.11■□□□□ 0.33
TOP3BO95985 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 FRMD8P1-201ENST00000440433 1524 ntBASIC17.11■□□□□ 0.33
TOP3BO95985 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TOP3BO95985 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
TOP3BO95985 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOP3BO95985 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TOP3BO95985 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TOP3BO95985 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOP3BO95985 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TOP3BO95985 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.1■□□□□ 0.33
TOP3BO95985 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TOP3BO95985 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TOP3BO95985 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOP3BO95985 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TOP3BO95985 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TOP3BO95985 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TOP3BO95985 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOP3BO95985 MRPL20P1-201ENST00000400819 433 ntBASIC17.1■□□□□ 0.33
TOP3BO95985 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TOP3BO95985 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.1■□□□□ 0.33
TOP3BO95985 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms