Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 AC006480.2-201ENST00000609770 1337 ntBASIC7.3□□□□□ -1.24
USH2AO75445 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 AL671710.1-201ENST00000610245 2349 ntBASIC7.3□□□□□ -1.24
USH2AO75445 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 MTX1P1-201ENST00000440904 838 ntBASIC7.3□□□□□ -1.24
USH2AO75445 ARTN-209ENST00000479128 471 ntTSL 3 BASIC7.3□□□□□ -1.24
USH2AO75445 AC134698.3-201ENST00000523880 214 ntBASIC7.3□□□□□ -1.24
USH2AO75445 MIR3147-201ENST00000577811 66 ntBASIC7.3□□□□□ -1.24
USH2AO75445 MIR4741-201ENST00000579822 90 ntBASIC7.3□□□□□ -1.24
USH2AO75445 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 DEK-201ENST00000244776 1441 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC7.3□□□□□ -1.24
USH2AO75445 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 YBX1P6-201ENST00000442962 1002 ntBASIC7.3□□□□□ -1.24
USH2AO75445 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC7.3□□□□□ -1.24
USH2AO75445 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC7.3□□□□□ -1.24
USH2AO75445 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 CFL1-206ENST00000527344 962 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 ENPP7P5-201ENST00000541031 1031 ntBASIC7.3□□□□□ -1.24
USH2AO75445 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC7.3□□□□□ -1.24
USH2AO75445 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
USH2AO75445 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
USH2AO75445 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC7.3□□□□□ -1.24
USH2AO75445 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
USH2AO75445 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC7.3□□□□□ -1.24
USH2AO75445 MPDU1-223ENST00000582151 728 ntBASIC7.3□□□□□ -1.24
USH2AO75445 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USH2AO75445 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC7.3□□□□□ -1.24
USH2AO75445 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 DEF8-202ENST00000418391 852 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC7.29□□□□□ -1.24
USH2AO75445 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 AC104982.3-201ENST00000581995 514 ntBASIC7.29□□□□□ -1.24
USH2AO75445 EEF1DP1-201ENST00000585891 896 ntBASIC7.29□□□□□ -1.24
USH2AO75445 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 AC133539.2-201ENST00000604757 467 ntBASIC7.29□□□□□ -1.24
USH2AO75445 AC074044.1-201ENST00000609673 707 ntBASIC7.29□□□□□ -1.24
USH2AO75445 AC244452.3-201ENST00000636814 210 ntBASIC7.29□□□□□ -1.24
USH2AO75445 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC7.29□□□□□ -1.24
USH2AO75445 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC7.29□□□□□ -1.24
USH2AO75445 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USH2AO75445 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms