Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
GFRA3O60609 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.98■□□□□ 0.15
GFRA3O60609 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.98■□□□□ 0.15
GFRA3O60609 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 ENPP7P5-201ENST00000541031 1031 ntBASIC15.98■□□□□ 0.15
GFRA3O60609 AL359711.2-201ENST00000563105 872 ntBASIC15.98■□□□□ 0.15
GFRA3O60609 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
GFRA3O60609 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 NDUFV2P1-201ENST00000596415 907 ntBASIC15.98■□□□□ 0.15
GFRA3O60609 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 AC148477.9-201ENST00000623974 539 ntBASIC15.98■□□□□ 0.15
GFRA3O60609 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.98■□□□□ 0.15
GFRA3O60609 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GFRA3O60609 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
GFRA3O60609 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.97■□□□□ 0.15
GFRA3O60609 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.97■□□□□ 0.15
GFRA3O60609 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 AL133466.1-201ENST00000447582 150 ntBASIC15.97■□□□□ 0.15
GFRA3O60609 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.97■□□□□ 0.15
GFRA3O60609 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GFRA3O60609 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.97■□□□□ 0.15
GFRA3O60609 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
GFRA3O60609 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.96■□□□□ 0.15
GFRA3O60609 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GFRA3O60609 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
GFRA3O60609 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.96■□□□□ 0.15
GFRA3O60609 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.96■□□□□ 0.15
GFRA3O60609 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.96■□□□□ 0.15
GFRA3O60609 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.96■□□□□ 0.15
GFRA3O60609 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.96■□□□□ 0.15
GFRA3O60609 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.96■□□□□ 0.15
GFRA3O60609 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.96■□□□□ 0.15
GFRA3O60609 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.96■□□□□ 0.15
GFRA3O60609 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.96■□□□□ 0.15
GFRA3O60609 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.96■□□□□ 0.15
GFRA3O60609 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.96■□□□□ 0.15
GFRA3O60609 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.96■□□□□ 0.15
GFRA3O60609 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.96■□□□□ 0.15
GFRA3O60609 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.96■□□□□ 0.15
GFRA3O60609 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms