Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA1O15239 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 AL603832.2-201ENST00000566195 2125 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 AL596087.1-201ENST00000400979 1969 ntBASIC11.47□□□□□ -0.57
NDUFA1O15239 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA1O15239 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
NDUFA1O15239 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
NDUFA1O15239 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NDUFA1O15239 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.46□□□□□ -0.57
NDUFA1O15239 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NDUFA1O15239 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.46□□□□□ -0.57
NDUFA1O15239 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NDUFA1O15239 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.46□□□□□ -0.57
NDUFA1O15239 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA1O15239 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.46□□□□□ -0.57
NDUFA1O15239 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.46□□□□□ -0.57
NDUFA1O15239 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.46□□□□□ -0.57
NDUFA1O15239 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.46□□□□□ -0.57
NDUFA1O15239 AL592071.1-201ENST00000611956 408 ntBASIC11.46□□□□□ -0.57
NDUFA1O15239 HYMAI.1-201ENST00000620949 238 ntBASIC11.46□□□□□ -0.57
NDUFA1O15239 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA1O15239 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.46□□□□□ -0.58
NDUFA1O15239 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
NDUFA1O15239 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.46□□□□□ -0.58
NDUFA1O15239 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFA1O15239 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NDUFA1O15239 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
NDUFA1O15239 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
NDUFA1O15239 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 AL136379.1-201ENST00000623471 2642 ntBASIC11.45□□□□□ -0.58
NDUFA1O15239 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
NDUFA1O15239 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.45□□□□□ -0.58
NDUFA1O15239 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 AC063952.2-201ENST00000498792 1227 ntBASIC11.45□□□□□ -0.58
NDUFA1O15239 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms