Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 AL512638.1-201ENST00000457493 794 ntBASIC19■□□□□ 0.63
ATP2A1O14983 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 HLA-V-204ENST00000476601 1289 ntBASIC19■□□□□ 0.63
ATP2A1O14983 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19■□□□□ 0.63
ATP2A1O14983 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19■□□□□ 0.63
ATP2A1O14983 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19■□□□□ 0.63
ATP2A1O14983 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19■□□□□ 0.63
ATP2A1O14983 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 AC008761.3-201ENST00000624803 892 ntBASIC19■□□□□ 0.63
ATP2A1O14983 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
ATP2A1O14983 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 AC100757.3-201ENST00000622361 1406 ntBASIC19■□□□□ 0.63
ATP2A1O14983 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATP2A1O14983 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP2A1O14983 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATP2A1O14983 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP2A1O14983 AP002490.2-201ENST00000524791 560 ntBASIC18.99■□□□□ 0.63
ATP2A1O14983 AC027369.6-201ENST00000525520 931 ntBASIC18.99■□□□□ 0.63
ATP2A1O14983 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP2A1O14983 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 LINC02560-201ENST00000596379 459 ntBASIC18.99■□□□□ 0.63
ATP2A1O14983 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 AC003101.2-201ENST00000612557 442 ntBASIC18.99■□□□□ 0.63
ATP2A1O14983 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.99■□□□□ 0.63
ATP2A1O14983 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP2A1O14983 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATP2A1O14983 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP2A1O14983 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ATP2A1O14983 AC020916.1-201ENST00000587762 1774 ntBASIC18.98■□□□□ 0.63
ATP2A1O14983 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
ATP2A1O14983 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ATP2A1O14983 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 MRPS18AP1-201ENST00000414458 589 ntBASIC18.98■□□□□ 0.63
ATP2A1O14983 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.98■□□□□ 0.63
ATP2A1O14983 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.98■□□□□ 0.63
ATP2A1O14983 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
ATP2A1O14983 SPDYE12P-201ENST00000618416 771 ntBASIC18.98■□□□□ 0.63
ATP2A1O14983 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ATP2A1O14983 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP2A1O14983 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATP2A1O14983 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP2A1O14983 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATP2A1O14983 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP2A1O14983 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ATP2A1O14983 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A1O14983 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms