Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AL513480.1-201ENST00000451731 511 ntBASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 SNHG9-202ENST00000564014 471 ntBASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 OR6D1P-203ENST00000641209 4860 ntBASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPDC1A2A3K4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AL671710.1-201ENST00000610245 2349 ntBASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ELL2P1-201ENST00000413990 1906 ntBASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AC005052.1-201ENST00000625181 2492 ntBASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 FAM58CP-201ENST00000435741 640 ntBASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPDC1A2A3K4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 DOC2GP-204ENST00000639052 2548 ntBASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.58■□□□□ 0.73
PTPDC1A2A3K4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 AC091167.2-201ENST00000579581 588 ntBASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 ACTL9-202ENST00000612068 1252 ntBASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPDC1A2A3K4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 PMS2P2-201ENST00000425039 1128 ntBASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPDC1A2A3K4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms