Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 REXO1L8P-201ENST00000604378 1897 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 PCGF3-213ENST00000620529 1899 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 PI4KAP1-204ENST00000612579 1703 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 PMS2P1-201ENST00000431037 1228 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SLC25A6P2-201ENST00000497974 877 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SART3-203ENST00000546611 1184 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 AL355877.3-201ENST00000622820 899 ntBASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV9S1A1TA0A576 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 CYP2A7P1-201ENST00000595391 815 ntBASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 MTDHP4-201ENST00000600287 670 ntBASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 AC011270.2-201ENST00000624293 2550 ntBASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV9S1A1TA0A576 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 FGFR3P6-201ENST00000457012 610 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms