Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC187A0A096LP49 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 AC098614.1-201ENST00000368528 745 ntBASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC187A0A096LP49 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 ATP5G2P4-201ENST00000442175 420 ntBASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 AC124947.2-201ENST00000547118 1133 ntBASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC187A0A096LP49 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC187A0A096LP49 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC187A0A096LP49 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC187A0A096LP49 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC187A0A096LP49 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC187A0A096LP49 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC187A0A096LP49 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms