Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 AC093525.9-201ENST00000624961 1746 ntBASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF1Q9Y6D6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 AL158212.4-201ENST00000624062 1286 ntBASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.03■□□□□ 0.8
ARFGEF1Q9Y6D6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 BRI3BPP1-201ENST00000594224 787 ntBASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.02■□□□□ 0.8
ARFGEF1Q9Y6D6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 AC007551.1-201ENST00000457394 519 ntBASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 AC104596.2-201ENST00000512793 793 ntBASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 SLC25A47P1-201ENST00000531577 414 ntBASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.02■□□□□ 0.79
ARFGEF1Q9Y6D6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 AC006538.1-201ENST00000567905 1585 ntBASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 RN7SL560P-201ENST00000577943 264 ntBASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 GNRHR2-203ENST00000581100 1187 ntBASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF1Q9Y6D6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 CALR4P-201ENST00000431943 946 ntBASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 AC116353.5-201ENST00000638148 1699 ntBASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF1Q9Y6D6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms