Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 AL589702.1-201ENST00000641229 1509 ntBASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTCBQ9Y3I0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 KRT223P-202ENST00000449164 1292 ntBASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AC133552.6-201ENST00000613406 534 ntBASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RTCBQ9Y3I0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 AC245100.3-201ENST00000441281 285 ntBASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 WFDC1-204ENST00000613603 549 ntBASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 MIR6775-201ENST00000617557 69 ntBASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 HTR7P1-202ENST00000624664 4411 ntBASIC20.79■□□□□ 0.92
RTCBQ9Y3I0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 AC092552.1-201ENST00000547243 906 ntBASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.78■□□□□ 0.92
RTCBQ9Y3I0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms