Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 LINC00982-205ENST00000420957 435 ntBASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AP005901.3-202ENST00000581653 237 ntBASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AC004817.3-201ENST00000602957 2129 ntBASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AC243591.1-201ENST00000452967 1364 ntBASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AL671710.1-201ENST00000610245 2349 ntBASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AC010491.1-201ENST00000563101 2797 ntBASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AC093827.2-201ENST00000512654 315 ntBASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 TERC-201ENST00000602385 541 ntBASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 AP000867.4-201ENST00000641616 219 ntBASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D4Q9Y2X8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
UBE2D4Q9Y2X8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms