Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 AC007326.2-201ENST00000624224 7579 ntBASIC16.39■□□□□ 0.21
SATB2Q9UPW6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SATB2Q9UPW6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 PP12613-201ENST00000424958 2230 ntBASIC16.38■□□□□ 0.21
SATB2Q9UPW6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 AL023806.1-201ENST00000603994 1649 ntBASIC16.38■□□□□ 0.21
SATB2Q9UPW6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 AC069262.1-201ENST00000539058 672 ntBASIC16.38■□□□□ 0.21
SATB2Q9UPW6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 AC026120.1-201ENST00000611536 926 ntBASIC16.38■□□□□ 0.21
SATB2Q9UPW6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 AC009093.7-201ENST00000623853 1223 ntBASIC16.38■□□□□ 0.21
SATB2Q9UPW6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SATB2Q9UPW6 AL645608.8-201ENST00000606034 2086 ntBASIC16.38■□□□□ 0.21
SATB2Q9UPW6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 PCDHA12-202ENST00000613593 2588 ntBASIC16.37■□□□□ 0.21
SATB2Q9UPW6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AC067863.1-201ENST00000494933 530 ntBASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AC093214.1-201ENST00000511688 1107 ntBASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 Z92544.3-201ENST00000624747 417 ntBASIC16.37■□□□□ 0.21
SATB2Q9UPW6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 AC103702.1-201ENST00000548801 2630 ntBASIC16.37■□□□□ 0.21
SATB2Q9UPW6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SATB2Q9UPW6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms