Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 SPDYE17-201ENST00000412399 783 ntBASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 GOLGA2P4-201ENST00000441462 777 ntBASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 KLF2P4-201ENST00000451959 1225 ntBASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 FO681548.1-201ENST00000455617 1132 ntBASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 AC018665.1-201ENST00000622927 1362 ntBASIC20■□□□□ 0.79
ZC3H4Q9UPT8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 CTBP2P5-201ENST00000454986 1264 ntBASIC20■□□□□ 0.79
ZC3H4Q9UPT8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZC3H4Q9UPT8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 PDIA3P1-201ENST00000471856 1510 ntBASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3H4Q9UPT8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 AC093525.8-201ENST00000624099 1342 ntBASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 AC099336.1-201ENST00000417053 1171 ntBASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 FAM21FP-201ENST00000426241 1131 ntBASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.98■□□□□ 0.79
ZC3H4Q9UPT8 PFN1P12-201ENST00000455938 534 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms