Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 AC105339.1-204ENST00000636249 355 ntBASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIP2Q9UDT6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 AC099522.2-201ENST00000607001 744 ntBASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 CICP6-201ENST00000457191 2729 ntBASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIP2Q9UDT6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLIP2Q9UDT6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 AL021920.2-201ENST00000624828 1351 ntBASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 AL671277.1-201ENST00000429656 993 ntBASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLIP2Q9UDT6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLIP2Q9UDT6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms