Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 AC008267.7-201ENST00000624570 1194 ntBASIC15.3■□□□□ 0.04
LRFN1Q9P244 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.29■□□□□ 0.04
LRFN1Q9P244 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 AC067863.1-201ENST00000494933 530 ntBASIC15.29■□□□□ 0.04
LRFN1Q9P244 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 AC027307.2-201ENST00000591252 911 ntBASIC15.29■□□□□ 0.04
LRFN1Q9P244 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 Z92544.3-201ENST00000624747 417 ntBASIC15.29■□□□□ 0.04
LRFN1Q9P244 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.29■□□□□ 0.04
LRFN1Q9P244 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRFN1Q9P244 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 AC006277.1-201ENST00000624348 1610 ntBASIC15.28■□□□□ 0.04
LRFN1Q9P244 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 CNN2P2-201ENST00000443536 909 ntBASIC15.28■□□□□ 0.04
LRFN1Q9P244 CNN2P3-201ENST00000450201 906 ntBASIC15.28■□□□□ 0.04
LRFN1Q9P244 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 KRT18P34-201ENST00000488218 1270 ntBASIC15.28■□□□□ 0.04
LRFN1Q9P244 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 AL136317.3-201ENST00000618497 906 ntBASIC15.28■□□□□ 0.04
LRFN1Q9P244 AP001059.3-201ENST00000619053 235 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms