Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC092658.1-201ENST00000505836 891 ntBASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC52A1Q9NWF4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 AC067852.2-201ENST00000590513 2313 ntBASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 HIST3H2BA-201ENST00000436555 524 ntBASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 RARRES2P5-201ENST00000564013 466 ntBASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 AC015936.2-201ENST00000593177 259 ntBASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 AL031731.1-201ENST00000642131 2094 ntBASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.54■■□□□ 1.36
SLC52A1Q9NWF4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 AC008735.3-201ENST00000596646 500 ntBASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 MIR8072-201ENST00000614241 80 ntBASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 AL645728.1-201ENST00000366221 2101 ntBASIC23.53■■□□□ 1.36
SLC52A1Q9NWF4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 MIR6775-201ENST00000617557 69 ntBASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 AL033527.5-201ENST00000641382 801 ntBASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC52A1Q9NWF4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 AC234783.1-201ENST00000441761 496 ntBASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 SNX29P1-201ENST00000548357 1007 ntBASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms