Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 MTND6P24-201ENST00000440466 518 ntBASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 AC098859.1-201ENST00000502915 1238 ntBASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FBXO28Q9NVF7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 HCG11-201ENST00000411553 5696 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AL603756.1-201ENST00000606511 2163 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 RNA5SP410-201ENST00000516285 106 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AL139011.1-202ENST00000642063 584 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 AC012313.1-201ENST00000593393 3059 ntBASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.05■□□□□ 0.64
FBXO28Q9NVF7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 AL031731.1-201ENST00000642131 2094 ntBASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FBXO28Q9NVF7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms