Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.27■□□□□ 0.83
ECHDC1Q9NTX5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ECHDC1Q9NTX5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ECHDC1Q9NTX5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ECHDC1Q9NTX5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AC016027.1-202ENST00000607927 1699 ntBASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 PKD1P1-201ENST00000458669 6805 ntBASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ECHDC1Q9NTX5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 ALG1L5P-201ENST00000482043 771 ntBASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 WASH6P-202ENST00000359512 1437 ntBASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ECHDC1Q9NTX5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 LINC01144-201ENST00000626198 1710 ntBASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 BX842568.4-201ENST00000421222 227 ntBASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 HTR5BP-201ENST00000430851 1154 ntBASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 MKNK2P1-201ENST00000437526 628 ntBASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 DNAJB3-201ENST00000446806 729 ntBASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms