Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 AC007541.1-201ENST00000570282 1469 ntBASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 AP3S2-216ENST00000617003 1561 ntBASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 AC098614.1-201ENST00000368528 745 ntBASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 FZD10-202ENST00000539839 3282 ntBASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM7Q9NR12 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AC017083.2-201ENST00000608069 979 ntBASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 AC012313.1-201ENST00000593393 3059 ntBASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PDLIM7Q9NR12 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AC106820.2-201ENST00000563775 3264 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AC022211.2-201ENST00000585075 2527 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 MIR1909-201ENST00000411312 80 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AL353779.1-201ENST00000434793 351 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 INE1-201ENST00000456273 945 ntBASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM7Q9NR12 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms