Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC026691.1-201ENST00000602502 2017 ntBASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 KRT19P2-202ENST00000557173 1012 ntBASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
CCSER1Q9C0I3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 AC092474.2-201ENST00000424288 719 ntBASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 AC140658.5-201ENST00000438532 169 ntBASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 BCAR1-209ENST00000546196 1340 ntBASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 AL391005.1-201ENST00000623953 2435 ntBASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCSER1Q9C0I3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCSER1Q9C0I3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms