Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC136632.2-201ENST00000512891 861 ntBASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC040169.1-201ENST00000565382 521 ntBASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC116407.2-201ENST00000613639 860 ntBASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC016396.2-201ENST00000562575 1417 ntBASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAF4Q9BUZ4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AL049757.1-201ENST00000616842 1596 ntBASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AC007967.2-201ENST00000432613 625 ntBASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TRAF4Q9BUZ4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 AC132938.5-201ENST00000624980 1813 ntBASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 AC003669.1-201ENST00000334569 611 ntBASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 KLF4P1-201ENST00000412782 1185 ntBASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 AC005104.2-201ENST00000427818 678 ntBASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 AC004706.3-202ENST00000621574 984 ntBASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF4Q9BUZ4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms