Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 AC009053.2-201ENST00000563701 2365 ntBASIC16.16■□□□□ 0.18
SLC38A3Q99624 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A3Q99624 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A3Q99624 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A3Q99624 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A3Q99624 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC38A3Q99624 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC38A3Q99624 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC38A3Q99624 NFIC-211ENST00000641145 8399 ntBASIC16.14■□□□□ 0.18
SLC38A3Q99624 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC38A3Q99624 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SLC38A3Q99624 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 SLC25A39P2-201ENST00000537614 270 ntBASIC16.14■□□□□ 0.17
SLC38A3Q99624 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 AP001059.3-201ENST00000619053 235 ntBASIC16.14■□□□□ 0.17
SLC38A3Q99624 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 AC006277.1-201ENST00000624348 1610 ntBASIC16.14■□□□□ 0.17
SLC38A3Q99624 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A3Q99624 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A3Q99624 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC38A3Q99624 SPDYE7P-202ENST00000420373 878 ntBASIC16.13■□□□□ 0.17
SLC38A3Q99624 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC38A3Q99624 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms