Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM47Q96LD4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 AC004890.2-204ENST00000481968 304 ntBASIC19.5■□□□□ 0.71
TRIM47Q96LD4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM47Q96LD4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 PIN1P1-201ENST00000412108 996 ntBASIC19.49■□□□□ 0.71
TRIM47Q96LD4 COX5BP8-201ENST00000416911 349 ntBASIC19.49■□□□□ 0.71
TRIM47Q96LD4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM47Q96LD4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 AC022211.2-201ENST00000585075 2527 ntBASIC19.48■□□□□ 0.71
TRIM47Q96LD4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 RN7SL692P-201ENST00000464677 288 ntBASIC19.48■□□□□ 0.71
TRIM47Q96LD4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 ALG1L8P-201ENST00000533887 760 ntBASIC19.48■□□□□ 0.71
TRIM47Q96LD4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 AL009183.1-201ENST00000603760 355 ntBASIC19.48■□□□□ 0.71
TRIM47Q96LD4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 LYSMD4-203ENST00000378904 2122 ntBASIC19.48■□□□□ 0.71
TRIM47Q96LD4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM47Q96LD4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM47Q96LD4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms