Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 KRT8P39-201ENST00000396270 1433 ntBASIC14.77□□□□□ -0.04
APH1AQ96BI3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
APH1AQ96BI3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APH1AQ96BI3 ELL2P1-201ENST00000413990 1906 ntBASIC14.77□□□□□ -0.04
APH1AQ96BI3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 AC211486.1-202ENST00000416371 468 ntBASIC14.77□□□□□ -0.05
APH1AQ96BI3 CEND1P1-201ENST00000451006 455 ntBASIC14.77□□□□□ -0.05
APH1AQ96BI3 AC211476.1-201ENST00000503899 468 ntBASIC14.77□□□□□ -0.05
APH1AQ96BI3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 MIR4469-201ENST00000583919 79 ntBASIC14.77□□□□□ -0.05
APH1AQ96BI3 AC092902.6-201ENST00000641783 218 ntBASIC14.77□□□□□ -0.05
APH1AQ96BI3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 AL139384.1-201ENST00000612143 3047 ntBASIC14.77□□□□□ -0.05
APH1AQ96BI3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
APH1AQ96BI3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APH1AQ96BI3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
APH1AQ96BI3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APH1AQ96BI3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.76□□□□□ -0.05
APH1AQ96BI3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
APH1AQ96BI3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APH1AQ96BI3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms