Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 DRAXINP1-201ENST00000437611 948 ntBASIC16.11■□□□□ 0.17
VPS33AQ96AX1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 TSPY26P-202ENST00000565928 3884 ntBASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC006277.1-201ENST00000624348 1610 ntBASIC16.1■□□□□ 0.17
VPS33AQ96AX1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 IGHV3-47-201ENST00000425060 335 ntBASIC16.1■□□□□ 0.17
VPS33AQ96AX1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AP002414.4-201ENST00000589764 1148 ntBASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC114341.1-201ENST00000618070 349 ntBASIC16.1■□□□□ 0.17
VPS33AQ96AX1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC243591.1-201ENST00000452967 1364 ntBASIC16.1■□□□□ 0.17
VPS33AQ96AX1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS33AQ96AX1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 LINC00265-3P-201ENST00000447588 903 ntBASIC16.09■□□□□ 0.17
VPS33AQ96AX1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.09■□□□□ 0.17
VPS33AQ96AX1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS33AQ96AX1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms